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SRX198048: GSM1023124: TET2 ChIP-seq results; Mus musculus; ChIP-Seq
1 ILLUMINA (Illumina Genome Analyzer) run: 17.5M spots, 875.3M bases, 578Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: OGT, H2B S112GlcNAc, TET2 ChIP-seq results
show Abstracthide Abstract
TET2 directly interacts with OGT, which is important for the chromatin association of OGT in vivo. Although this specific interaction does not regulate the enzymatic activity of TET2, it facilitates OGT-dependent histone O-GlcNAcylation. Moreover, OGT associates with TET2 at transcription starting sites (TSS). Down-regulation of TET2 reduces the amount of H2B S112 GlcNAc marks in vivo, which are associated with gene transcription regulation. Overall design: We found that OGT interacts with TET2 tightly. Using ChIP-seq with specific antibodies, we tested the co-localization of TET2 and OGT in genome level.
Sample: TET2 ChIP-seq results
SAMN01773263 • SRS371345 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina Genome Analyzer
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Experiment attributes:
GEO Accession: GSM1023124
Links:
External link:
Runs: 1 run, 17.5M spots, 875.3M bases, 578Mb
Run# of Spots# of BasesSizePublished
SRR59787117,505,302875.3M578Mb2012-12-11

ID:
262012

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